STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02525.1Hypothetical protein. (611 aa)    
Predicted Functional Partners:
AKI99978.1
Trans-aconitate 2-methyltransferase.
  
     0.723
AKJ00312.1
High-affnity carbon uptake protein Hat/HatR.
  
   
 0.723
AKI99751.1
1,4-dihydroxy-2-naphthoate polyprenyltransferase.
 
   
 0.659
AKJ03766.1
Sensory transduction histidine kinase.
  
     0.608
AKJ05352.1
NAD-dependent protein deacetylase.
  
     0.590
AKJ02530.1
Carbon monoxide oxidation accessory protein CoxG.
  
     0.582
AKJ06171.1
Hypothetical protein.
  
     0.557
AKJ01365.1
Glutathione synthase.
  
     0.556
AKI99540.1
Lycopene cyclase, CruA type.
  
   
 0.551
AKJ01366.1
Integrase.
  
     0.536
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.