Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI98703.1 | AKJ02543.1 | AA314_00330 | AA314_04169 | Methyl-accepting chemotaxis protein. | Signal transduction histidine kinase CheA. | 0.953 |
AKI98703.1 | AKJ02544.1 | AA314_00330 | AA314_04170 | Methyl-accepting chemotaxis protein. | Positive regulator of CheA protein activity. | 0.924 |
AKI98703.1 | AKJ02545.1 | AA314_00330 | AA314_04171 | Methyl-accepting chemotaxis protein. | Positive regulator of CheA protein activity. | 0.917 |
AKI98703.1 | AKJ02547.1 | AA314_00330 | AA314_04173 | Methyl-accepting chemotaxis protein. | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.924 |
AKI98703.1 | cheB-2 | AA314_00330 | AA314_04174 | Methyl-accepting chemotaxis protein. | Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.936 |
AKJ02543.1 | AKI98703.1 | AA314_04169 | AA314_00330 | Signal transduction histidine kinase CheA. | Methyl-accepting chemotaxis protein. | 0.953 |
AKJ02543.1 | AKJ02544.1 | AA314_04169 | AA314_04170 | Signal transduction histidine kinase CheA. | Positive regulator of CheA protein activity. | 0.972 |
AKJ02543.1 | AKJ02545.1 | AA314_04169 | AA314_04171 | Signal transduction histidine kinase CheA. | Positive regulator of CheA protein activity. | 0.977 |
AKJ02543.1 | AKJ02547.1 | AA314_04169 | AA314_04173 | Signal transduction histidine kinase CheA. | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.951 |
AKJ02543.1 | AKJ05296.1 | AA314_04169 | AA314_06922 | Signal transduction histidine kinase CheA. | Hypothetical protein. | 0.953 |
AKJ02543.1 | AKJ07800.1 | AA314_04169 | AA314_09426 | Signal transduction histidine kinase CheA. | Methyl-accepting chemotaxis protein. | 0.956 |
AKJ02543.1 | AKJ08118.1 | AA314_04169 | AA314_09744 | Signal transduction histidine kinase CheA. | Type IV pilus biogenesis protein PilJ. | 0.965 |
AKJ02543.1 | AKJ08128.1 | AA314_04169 | AA314_09754 | Signal transduction histidine kinase CheA. | Methyl-accepting chemotaxis protein I. | 0.962 |
AKJ02543.1 | AKJ08129.1 | AA314_04169 | AA314_09755 | Signal transduction histidine kinase CheA. | Methyl-accepting chemotaxis protein I. | 0.962 |
AKJ02543.1 | cheB-2 | AA314_04169 | AA314_04174 | Signal transduction histidine kinase CheA. | Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.988 |
AKJ02544.1 | AKI98703.1 | AA314_04170 | AA314_00330 | Positive regulator of CheA protein activity. | Methyl-accepting chemotaxis protein. | 0.924 |
AKJ02544.1 | AKJ02543.1 | AA314_04170 | AA314_04169 | Positive regulator of CheA protein activity. | Signal transduction histidine kinase CheA. | 0.972 |
AKJ02544.1 | AKJ02545.1 | AA314_04170 | AA314_04171 | Positive regulator of CheA protein activity. | Positive regulator of CheA protein activity. | 0.961 |
AKJ02544.1 | AKJ02547.1 | AA314_04170 | AA314_04173 | Positive regulator of CheA protein activity. | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.915 |
AKJ02544.1 | AKJ05296.1 | AA314_04170 | AA314_06922 | Positive regulator of CheA protein activity. | Hypothetical protein. | 0.916 |
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