Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ02424.1 | AKJ02806.1 | AA314_04050 | AA314_04432 | Malonyl CoA-acyl carrier protein transacylase. | Malonyl CoA-acyl carrier protein transacylase. | 0.999 |
AKJ02424.1 | AKJ02809.1 | AA314_04050 | AA314_04435 | Malonyl CoA-acyl carrier protein transacylase. | Malonyl CoA-acyl carrier protein transacylase. | 0.999 |
AKJ02424.1 | AKJ03360.1 | AA314_04050 | AA314_04986 | Malonyl CoA-acyl carrier protein transacylase. | Malonyl CoA-acyl carrier protein transacylase. | 0.999 |
AKJ02424.1 | AKJ03529.1 | AA314_04050 | AA314_05155 | Malonyl CoA-acyl carrier protein transacylase. | Malonyl CoA-acyl carrier protein transacylase. | 0.999 |
AKJ02424.1 | rplK | AA314_04050 | AA314_06554 | Malonyl CoA-acyl carrier protein transacylase. | LSU ribosomal protein L11p; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.950 |
AKJ02424.1 | rplQ | AA314_04050 | AA314_04758 | Malonyl CoA-acyl carrier protein transacylase. | LSU ribosomal protein L17p. | 0.972 |
AKJ02424.1 | rplU | AA314_04050 | AA314_02928 | Malonyl CoA-acyl carrier protein transacylase. | LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.978 |
AKJ02424.1 | rpsQ | AA314_04050 | AA314_04737 | Malonyl CoA-acyl carrier protein transacylase. | SSU ribosomal protein S17p; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.838 |
AKJ02424.1 | ybeY | AA314_04050 | AA314_04198 | Malonyl CoA-acyl carrier protein transacylase. | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.875 |
AKJ02570.1 | ybeY | AA314_04196 | AA314_04198 | Phosphate starvation-inducible protein PhoH. | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.936 |
AKJ02806.1 | AKJ02424.1 | AA314_04432 | AA314_04050 | Malonyl CoA-acyl carrier protein transacylase. | Malonyl CoA-acyl carrier protein transacylase. | 0.999 |
AKJ02806.1 | AKJ02809.1 | AA314_04432 | AA314_04435 | Malonyl CoA-acyl carrier protein transacylase. | Malonyl CoA-acyl carrier protein transacylase. | 0.999 |
AKJ02806.1 | AKJ03360.1 | AA314_04432 | AA314_04986 | Malonyl CoA-acyl carrier protein transacylase. | Malonyl CoA-acyl carrier protein transacylase. | 0.999 |
AKJ02806.1 | AKJ03529.1 | AA314_04432 | AA314_05155 | Malonyl CoA-acyl carrier protein transacylase. | Malonyl CoA-acyl carrier protein transacylase. | 0.999 |
AKJ02806.1 | rplK | AA314_04432 | AA314_06554 | Malonyl CoA-acyl carrier protein transacylase. | LSU ribosomal protein L11p; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.950 |
AKJ02806.1 | rplQ | AA314_04432 | AA314_04758 | Malonyl CoA-acyl carrier protein transacylase. | LSU ribosomal protein L17p. | 0.972 |
AKJ02806.1 | rplU | AA314_04432 | AA314_02928 | Malonyl CoA-acyl carrier protein transacylase. | LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.978 |
AKJ02806.1 | rpsQ | AA314_04432 | AA314_04737 | Malonyl CoA-acyl carrier protein transacylase. | SSU ribosomal protein S17p; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.838 |
AKJ02806.1 | ybeY | AA314_04432 | AA314_04198 | Malonyl CoA-acyl carrier protein transacylase. | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.875 |
AKJ02809.1 | AKJ02424.1 | AA314_04435 | AA314_04050 | Malonyl CoA-acyl carrier protein transacylase. | Malonyl CoA-acyl carrier protein transacylase. | 0.999 |
page 1 of 5