Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
lolDLipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (227 aa)    
Predicted Functional Partners:
AKJ02580.1
Lipoprotein releasing system transmembrane protein LolC.
 
 0.986
AKJ04513.1
Cell division protein FtsX.
 
 0.964
AKJ04512.1
Cell division protein FtsX.
 
 0.963
AKJ07314.1
Macrolide export ATP-binding/permease protein MacB.
 
 0.958
lysS
Lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
     0.823
AKJ00787.1
ABC transporter, permease protein.
 
 
 0.811
AKJ00786.1
Cell division protein FtsX.
 
 
 0.808
AKJ05840.1
Hypothetical protein.
 
 
 0.700
AKJ01541.1
Hypothetical protein.
 
 
 0.681
AKJ07898.1
ABC transporter, permease protein.
 
 
 0.628
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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