Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI99920.1 | AKJ02583.1 | AA314_01547 | AA314_04209 | Hypothetical protein. | Outer membrane protein H precursor. | 0.654 |
AKI99920.1 | AKJ05847.1 | AA314_01547 | AA314_07473 | Hypothetical protein. | tolB protein precursor protein. | 0.481 |
AKI99920.1 | AKJ06640.1 | AA314_01547 | AA314_08266 | Hypothetical protein. | Outer membrane protein assembly factor YaeT precursor. | 0.474 |
AKI99920.1 | AKJ07477.1 | AA314_01547 | AA314_09103 | Hypothetical protein. | Outer membrane protein assembly factor YaeT precursor. | 0.452 |
AKI99920.1 | bamA | AA314_01547 | AA314_04208 | Hypothetical protein. | Outer membrane protein assembly factor YaeT precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.452 |
AKI99920.1 | fabZ | AA314_01547 | AA314_04211 | Hypothetical protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.516 |
AKI99920.1 | lpxA | AA314_01547 | AA314_04212 | Hypothetical protein. | Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.756 |
AKJ02583.1 | AKI99920.1 | AA314_04209 | AA314_01547 | Outer membrane protein H precursor. | Hypothetical protein. | 0.654 |
AKJ02583.1 | AKJ02587.1 | AA314_04209 | AA314_04213 | Outer membrane protein H precursor. | Hypothetical protein. | 0.740 |
AKJ02583.1 | AKJ05847.1 | AA314_04209 | AA314_07473 | Outer membrane protein H precursor. | tolB protein precursor protein. | 0.653 |
AKJ02583.1 | AKJ06640.1 | AA314_04209 | AA314_08266 | Outer membrane protein H precursor. | Outer membrane protein assembly factor YaeT precursor. | 0.690 |
AKJ02583.1 | AKJ07477.1 | AA314_04209 | AA314_09103 | Outer membrane protein H precursor. | Outer membrane protein assembly factor YaeT precursor. | 0.751 |
AKJ02583.1 | bamA | AA314_04209 | AA314_04208 | Outer membrane protein H precursor. | Outer membrane protein assembly factor YaeT precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.924 |
AKJ02583.1 | bamD | AA314_04209 | AA314_03352 | Outer membrane protein H precursor. | Competence protein ComL precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.734 |
AKJ02583.1 | fabZ | AA314_04209 | AA314_04211 | Outer membrane protein H precursor. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.888 |
AKJ02583.1 | lpxA | AA314_04209 | AA314_04212 | Outer membrane protein H precursor. | Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.868 |
AKJ02583.1 | lpxD | AA314_04209 | AA314_04210 | Outer membrane protein H precursor. | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.922 |
AKJ02587.1 | AKJ02583.1 | AA314_04213 | AA314_04209 | Hypothetical protein. | Outer membrane protein H precursor. | 0.740 |
AKJ02587.1 | bamA | AA314_04213 | AA314_04208 | Hypothetical protein. | Outer membrane protein assembly factor YaeT precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.668 |
AKJ02587.1 | fabZ | AA314_04213 | AA314_04211 | Hypothetical protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.768 |
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