STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02591.1Glycosyl transferase, group 2 family protein. (239 aa)    
Predicted Functional Partners:
AKJ07191.1
Glycosyl transferase, group 2 family protein.
 
  
 
0.927
AKJ02590.1
Membrane protein, MarC family.
       0.778
lpxB
Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
     
 0.731
AKJ06349.1
Polymyxin resistance protein ArnT.
  
  
 0.715
AKJ07947.1
Hypothetical protein.
 
  
 0.658
AKJ02531.1
Hypothetical protein.
 
  
 0.651
AKJ05132.1
Capsular polysaccharide biosynthesis protein.
 
  
 0.637
AKJ06637.1
Hypothetical protein.
 
  
 0.632
AKJ06994.1
Hypothetical protein.
  
 0.615
AKJ00258.1
CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.603
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.