Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02593.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
AKJ02594.1
Hypothetical protein.
       0.787
AKJ02595.1
Hypothetical protein.
 
     0.557
lpxB
Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
       0.512
AKJ02745.1
Death on curing protein, Doc toxin.
  
     0.492
AKJ02590.1
Membrane protein, MarC family.
       0.470
AKJ02591.1
Glycosyl transferase, group 2 family protein.
       0.470
AKJ03607.1
Hypothetical protein.
  
     0.466
AKJ07033.1
Hypothetical protein.
  
     0.441
AKJ07447.1
Hypothetical protein.
  
     0.436
AKI99139.1
Hypothetical protein.
  
     0.426
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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