STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02595.1Hypothetical protein. (202 aa)    
Predicted Functional Partners:
AKI99740.1
Hypothetical protein.
  
     0.676
AKJ07441.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.651
AKJ04091.1
Protein ImpG/VasA.
  
     0.582
AKJ03448.1
Sensor histidine kinase.
  
     0.578
AKJ03610.1
Hypothetical protein.
  
     0.577
AKJ02456.1
3',5'-cyclic-nucleotide phosphodiesterase.
  
     0.576
AKJ07493.1
Cytochrome c family protein.
  
     0.571
AKJ04966.1
Lanthionine biosynthesis protein LanB.
  
     0.562
AKJ02593.1
Hypothetical protein.
 
     0.557
AKJ01505.1
Hypothetical protein.
  
     0.554
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.