STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02602.1DNA polymerase X family. (382 aa)    
Predicted Functional Partners:
AKJ02600.1
Cell division protein FtsK.
 
     0.821
AKJ02601.1
Lipid A export ATP-binding/permease protein MsbA.
       0.782
AKJ06641.1
Hypothetical protein.
  
     0.541
AKJ04428.1
Hypothetical protein.
  
     0.498
AKJ05539.1
Putative lipoprotein.
  
     0.483
AKJ00779.1
Cell division protein FtsK.
  
     0.477
AKJ05504.1
Hypothetical protein.
  
     0.468
AKJ06347.1
ABC transporter, permease protein.
  
     0.464
AKJ03638.1
Hypothetical protein.
  
     0.453
AKJ05153.1
Putative lipoprotein.
  
     0.453
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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