STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02614.1Lysine 2,3-aminomutase. (399 aa)    
Predicted Functional Partners:
AKJ02613.1
Lysine 2,3-aminomutase.
 
  
 
0.980
AKJ02920.1
L-beta-lysine 5,6-aminomutase alpha subunit.
 
  
 0.951
AKJ02922.1
L-beta-lysine 5,6-aminomutase beta subunit.
 
  
 0.950
AKJ05416.1
Lysyl-lysine 2,3-aminomutase.
  
  
 
0.926
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.806
AKJ06343.1
Translation elongation factor P Lys34:lysine transferase.
 
  
 0.631
AKJ02923.1
3-aminobutyryl-CoA ammonia-lyase.
 
   
 0.616
AKJ06989.1
D-alanine--D-alanine ligase.
     0.605
AKJ02919.1
3,5-diaminohexanoate dehydrogenase.
 
     0.593
AKJ02857.1
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family.
  
  
 0.585
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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