Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ01259.1 | AKJ02617.1 | AA314_02885 | AA314_04243 | Putative peptidase. | Sporulation protein. | 0.459 |
AKJ01489.1 | AKJ02617.1 | AA314_03115 | AA314_04243 | Soluble lytic murein transglycosylase precursor. | Sporulation protein. | 0.522 |
AKJ01489.1 | AKJ06607.1 | AA314_03115 | AA314_08233 | Soluble lytic murein transglycosylase precursor. | Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP. | 0.419 |
AKJ01730.1 | AKJ02617.1 | AA314_03356 | AA314_04243 | N-acetylmuramoyl-L-alanine amidase. | Sporulation protein. | 0.442 |
AKJ01730.1 | AKJ06607.1 | AA314_03356 | AA314_08233 | N-acetylmuramoyl-L-alanine amidase. | Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP. | 0.560 |
AKJ01896.1 | AKJ02617.1 | AA314_03522 | AA314_04243 | Membrane protein. | Sporulation protein. | 0.483 |
AKJ02148.1 | AKJ02617.1 | AA314_03774 | AA314_04243 | Hypothetical protein; Belongs to the SpoVG family. | Sporulation protein. | 0.425 |
AKJ02617.1 | AKJ01259.1 | AA314_04243 | AA314_02885 | Sporulation protein. | Putative peptidase. | 0.459 |
AKJ02617.1 | AKJ01489.1 | AA314_04243 | AA314_03115 | Sporulation protein. | Soluble lytic murein transglycosylase precursor. | 0.522 |
AKJ02617.1 | AKJ01730.1 | AA314_04243 | AA314_03356 | Sporulation protein. | N-acetylmuramoyl-L-alanine amidase. | 0.442 |
AKJ02617.1 | AKJ01896.1 | AA314_04243 | AA314_03522 | Sporulation protein. | Membrane protein. | 0.483 |
AKJ02617.1 | AKJ02148.1 | AA314_04243 | AA314_03774 | Sporulation protein. | Hypothetical protein; Belongs to the SpoVG family. | 0.425 |
AKJ02617.1 | AKJ04335.1 | AA314_04243 | AA314_05961 | Sporulation protein. | Soluble lytic murein transglycosylase precursor. | 0.473 |
AKJ02617.1 | AKJ06252.1 | AA314_04243 | AA314_07878 | Sporulation protein. | Cell wall endopeptidase, family M23/M37. | 0.456 |
AKJ02617.1 | AKJ06607.1 | AA314_04243 | AA314_08233 | Sporulation protein. | Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP. | 0.593 |
AKJ02617.1 | queA | AA314_04243 | AA314_04244 | Sporulation protein. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.655 |
AKJ02617.1 | tgt | AA314_04243 | AA314_04245 | Sporulation protein. | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | 0.608 |
AKJ04335.1 | AKJ02617.1 | AA314_05961 | AA314_04243 | Soluble lytic murein transglycosylase precursor. | Sporulation protein. | 0.473 |
AKJ04335.1 | AKJ06607.1 | AA314_05961 | AA314_08233 | Soluble lytic murein transglycosylase precursor. | Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP. | 0.420 |
AKJ06252.1 | AKJ02617.1 | AA314_07878 | AA314_04243 | Cell wall endopeptidase, family M23/M37. | Sporulation protein. | 0.456 |
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