Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI99786.1 | AKJ00795.1 | AA314_01413 | AA314_02421 | Chemotaxis protein methyltransferase CheR. | Response regulator of zinc sigma-54-dependent two-component system. | 0.523 |
AKI99786.1 | AKJ02635.1 | AA314_01413 | AA314_04261 | Chemotaxis protein methyltransferase CheR. | Response regulator of zinc sigma-54-dependent two-component system. | 0.523 |
AKI99786.1 | AKJ02636.1 | AA314_01413 | AA314_04262 | Chemotaxis protein methyltransferase CheR. | Two-component system sensor histidine kinase/response regulator, hybrid. | 0.481 |
AKI99786.1 | AKJ03455.1 | AA314_01413 | AA314_05081 | Chemotaxis protein methyltransferase CheR. | Response regulator of zinc sigma-54-dependent two-component system. | 0.584 |
AKI99786.1 | AKJ04331.1 | AA314_01413 | AA314_05957 | Chemotaxis protein methyltransferase CheR. | Flagellar synthesis regulator FleN. | 0.544 |
AKI99786.1 | AKJ05823.1 | AA314_01413 | AA314_07449 | Chemotaxis protein methyltransferase CheR. | Flagellar motor switch protein FliM. | 0.993 |
AKI99786.1 | AKJ08495.1 | AA314_01413 | AA314_10121 | Chemotaxis protein methyltransferase CheR. | Response regulator of zinc sigma-54-dependent two-component system. | 0.523 |
AKJ00529.1 | AKJ02635.1 | AA314_02155 | AA314_04261 | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Response regulator of zinc sigma-54-dependent two-component system. | 0.698 |
AKJ00529.1 | AKJ03455.1 | AA314_02155 | AA314_05081 | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Response regulator of zinc sigma-54-dependent two-component system. | 0.765 |
AKJ00795.1 | AKI99786.1 | AA314_02421 | AA314_01413 | Response regulator of zinc sigma-54-dependent two-component system. | Chemotaxis protein methyltransferase CheR. | 0.523 |
AKJ00795.1 | AKJ02635.1 | AA314_02421 | AA314_04261 | Response regulator of zinc sigma-54-dependent two-component system. | Response regulator of zinc sigma-54-dependent two-component system. | 0.561 |
AKJ00795.1 | AKJ04331.1 | AA314_02421 | AA314_05957 | Response regulator of zinc sigma-54-dependent two-component system. | Flagellar synthesis regulator FleN. | 0.447 |
AKJ00795.1 | AKJ05823.1 | AA314_02421 | AA314_07449 | Response regulator of zinc sigma-54-dependent two-component system. | Flagellar motor switch protein FliM. | 0.723 |
AKJ02634.1 | AKJ02635.1 | AA314_04260 | AA314_04261 | Outer membrane autotransporter barrel domain protein. | Response regulator of zinc sigma-54-dependent two-component system. | 0.523 |
AKJ02634.1 | AKJ02636.1 | AA314_04260 | AA314_04262 | Outer membrane autotransporter barrel domain protein. | Two-component system sensor histidine kinase/response regulator, hybrid. | 0.523 |
AKJ02635.1 | AKI99786.1 | AA314_04261 | AA314_01413 | Response regulator of zinc sigma-54-dependent two-component system. | Chemotaxis protein methyltransferase CheR. | 0.523 |
AKJ02635.1 | AKJ00529.1 | AA314_04261 | AA314_02155 | Response regulator of zinc sigma-54-dependent two-component system. | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.698 |
AKJ02635.1 | AKJ00795.1 | AA314_04261 | AA314_02421 | Response regulator of zinc sigma-54-dependent two-component system. | Response regulator of zinc sigma-54-dependent two-component system. | 0.561 |
AKJ02635.1 | AKJ02634.1 | AA314_04261 | AA314_04260 | Response regulator of zinc sigma-54-dependent two-component system. | Outer membrane autotransporter barrel domain protein. | 0.523 |
AKJ02635.1 | AKJ02636.1 | AA314_04261 | AA314_04262 | Response regulator of zinc sigma-54-dependent two-component system. | Two-component system sensor histidine kinase/response regulator, hybrid. | 0.841 |
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