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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
AKJ02635.1Response regulator of zinc sigma-54-dependent two-component system. (488 aa)    
Predicted Functional Partners:
AKJ02636.1
Two-component system sensor histidine kinase/response regulator, hybrid.
 
 
 
 0.830
AKJ05823.1
Flagellar motor switch protein FliM.
  
  
 0.723
AKJ00529.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.699
AKJ08495.1
Response regulator of zinc sigma-54-dependent two-component system.
  
     0.585
AKJ00795.1
Response regulator of zinc sigma-54-dependent two-component system.
  
     0.561
AKJ02634.1
Outer membrane autotransporter barrel domain protein.
       0.523
AKJ02637.1
Sulfate permease.
       0.505
AKJ03303.1
Sensory box histidine kinase/response regulator.
 
 
 0.458
AKJ04331.1
Flagellar synthesis regulator FleN.
  
 
 0.452
AKJ04336.1
Flagellar sensor histidine kinase FleS.
  
 
 0.404
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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