STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02639.1Amidohydrolase. (457 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.651
hutH
Histidine ammonia-lyase.
  
  
 0.651
AKJ02638.1
Esterase A.
       0.592
AKJ02640.1
Serine/threonine protein kinase PrkC, regulator of stationary phase.
       0.510
AKJ04982.1
Hypothetical protein.
 
    0.460
AKJ00001.1
Hypothetical protein.
  
     0.436
AKJ00102.1
Hypothetical protein.
  
     0.432
AKJ04950.1
Aminopeptidase.
  
     0.425
AKI99176.1
Peptidase S9, prolyl oligopeptidase active site region.
 
     0.416
AKJ02038.1
Glutaryl-7-ACA acylase.
  
     0.403
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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