Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKJ02652.1Cell division protein DivIC. (441 aa)    
Predicted Functional Partners:
AKJ02653.1
MoxR-like ATPase.
  
 0.902
AKJ04886.1
RDD family protein.
 
    0.840
AKJ05783.1
RDD domain protein.
 
    0.839
AKJ04887.1
Hypothetical protein.
 
  
 0.803
AKJ05774.1
Hypothetical protein.
 
  
 0.803
AKJ02654.1
Hypothetical protein.
       0.773
AKJ05767.1
MoxR-like ATPase.
 
  
 0.677
AKJ06458.1
MoxR-like ATPase in aerotolerance operon.
 
  
 0.556
AKJ05765.1
Hypothetical protein.
 
     0.550
AKJ07660.1
MoxR protein.
 
  
 0.476
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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