Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ02655.1Peptidyl-prolyl cis-trans isomerase PpiA precursor. (685 aa)    
Predicted Functional Partners:
AKJ05086.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.866
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.764
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.749
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.749
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.749
AKJ03529.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.728
AKJ03360.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.727
AKJ00054.1
Long-chain-fatty-acid--CoA ligase.
  
 
 0.718
AKJ04231.1
Non-ribosomal peptide synthase.
  
 
 0.718
AKJ05633.1
Putative heat shock protein, hsp90-family.
 
 0.706
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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