STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02657.1Hypothetical protein. (320 aa)    
Predicted Functional Partners:
AKJ02922.1
L-beta-lysine 5,6-aminomutase beta subunit.
 
  
  0.948
AKJ02920.1
L-beta-lysine 5,6-aminomutase alpha subunit.
 
  
  0.942
AKJ06769.1
D-amino-acid oxidase.
     
  0.900
AKJ02658.1
Hypothetical protein.
       0.749
AKJ02659.1
Acyl dehydratase.
       0.749
dapA
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
  
  0.572
AKJ07887.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.
     
  0.499
AKJ03638.1
Hypothetical protein.
  
     0.428
AKJ05847.1
tolB protein precursor protein.
 
     0.422
AKJ02923.1
3-aminobutyryl-CoA ammonia-lyase.
  
     0.416
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.