STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02661.1Chorismate mutase I. (395 aa)    
Predicted Functional Partners:
AKJ04263.1
Aspartate aminotransferase.
 
 
 0.990
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
 
 
 0.980
AKJ00157.1
Prephenate/arogenate dehydrogenase.
 
 0.975
AKJ03397.1
2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I beta.
 
  
 0.968
AKJ03938.1
Aspartate aminotransferase.
 
 
 0.966
AKJ07139.1
Anthranilate synthase, aminase component.
 
 
 0.958
AKJ04597.1
Histidinol-phosphate aminotransferase.
 
 
 0.957
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
 
 
 0.956
AKJ07138.1
Anthranilate synthase, amidotransferase component.
 
 
 0.953
AKI98806.1
Cyclohexadienyl dehydratase.
  
 
 0.943
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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