Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKJ02665.1Biopolymer transport protein ExbD/TolR. (150 aa)    
Predicted Functional Partners:
AKJ02666.1
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.979
AKJ07517.1
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.907
AKJ06617.1
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.905
AKI99361.1
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.895
AKJ01277.1
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.893
AKJ07964.1
Ferric siderophore transport system, biopolymer transport protein ExbB.
 
 
 0.880
AKJ05038.1
Ferric siderophore transport system, biopolymer transport protein ExbB.
 
 
 0.750
AKJ06010.1
Nicel/Cobalt-specific TonB-dependent outer membrane receptor.
  
 
 0.684
bamA
Outer membrane protein assembly factor YaeT precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.630
AKJ04296.1
Putative abductin-like protein.
 
 
 0.573
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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