Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ02668.1Type IV fimbrial assembly, ATPase PilB. (250 aa)    
Predicted Functional Partners:
AKJ06663.1
Type IV fimbrial assembly protein PilC.
 
 
 0.941
AKJ00954.1
General secretion pathway protein F.
 
 
 0.911
AKJ05719.1
General secretion pathway protein F.
 
 
 0.900
AKJ06653.1
Type IV pilus biogenesis protein PilM.
 
 
 
 0.849
AKJ06656.1
Leader peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.797
AKJ02669.1
Type IV fimbrial assembly, ATPase PilB.
 
    
0.781
AKJ06019.1
Type IV pilin PilA.
 
 
 0.762
AKJ06664.1
Twitching motility protein PilT.
 
  
 0.754
AKJ01723.1
Twitching motility protein PilT.
 
  
 0.747
AKJ03406.1
Twitching motility protein PilT.
 
  
 0.718
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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