STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02669.1Type IV fimbrial assembly, ATPase PilB. (360 aa)    
Predicted Functional Partners:
AKJ06663.1
Type IV fimbrial assembly protein PilC.
 
 
 0.794
AKJ02668.1
Type IV fimbrial assembly, ATPase PilB.
 
    
0.782
AKJ00649.1
Type IV fimbrial assembly, ATPase PilB.
  
     0.773
AKJ03813.1
Type IV fimbrial assembly, ATPase PilB.
  
     0.773
AKI98819.1
Type IV fimbrial assembly, ATPase PilB.
  
     0.772
AKJ07965.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
     0.772
AKJ00195.1
Type IV fimbrial assembly, ATPase PilB.
  
     0.771
AKJ06653.1
Type IV pilus biogenesis protein PilM.
 
 
 
 0.762
AKJ00954.1
General secretion pathway protein F.
 
 
 0.754
AKJ05719.1
General secretion pathway protein F.
 
 
 0.723
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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