STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02681.1Pilus biogenesis protein, TadE family. (382 aa)    
Predicted Functional Partners:
AKJ02683.1
Hypothetical protein.
     
 0.848
AKJ02682.1
Hypothetical protein.
       0.785
AKJ02677.1
Hypothetical protein.
       0.773
AKJ02678.1
Hypothetical protein.
       0.773
AKJ02679.1
Hypothetical protein.
       0.773
AKJ02680.1
Hypothetical protein.
       0.773
AKJ02684.1
Flp pilus assembly protein RcpC/CpaB.
  
  
 0.747
AKJ02685.1
Flp pilus assembly protein TadB.
  
  
 0.696
AKJ02686.1
Type II/IV secretion system protein TadC, associated with Flp pilus assembly.
  
    0.649
AKJ04906.1
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.
  
  
 0.506
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.