Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02684.1Flp pilus assembly protein RcpC/CpaB. (274 aa)    
Predicted Functional Partners:
AKJ02685.1
Flp pilus assembly protein TadB.
 
 
 0.998
AKJ02686.1
Type II/IV secretion system protein TadC, associated with Flp pilus assembly.
 
 
 0.998
AKJ04907.1
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly; Belongs to the bacterial secretin family.
 
 
 0.996
AKJ00065.1
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.
 
 
 0.992
AKJ04906.1
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.
 
 
 0.991
AKJ02059.1
Hypothetical protein.
  
  
 0.843
AKJ04908.1
Type IV prepilin peptidase TadV/CpaA.
 
   
 0.800
AKJ06282.1
Hypothetical protein.
 
     0.798
AKJ02683.1
Hypothetical protein.
  
  
 0.785
AKJ02681.1
Pilus biogenesis protein, TadE family.
  
  
 0.784
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.