Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ02691.1Serine phosphatase RsbU, regulator of sigma subunit. (129 aa)    
Predicted Functional Partners:
AKJ08284.1
Sensory box histidine kinase.
 
 
 0.851
AKJ03209.1
Multi-sensor signal transduction histidine kinase.
 
 
 0.850
AKJ07310.1
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.840
AKJ08110.1
Histidine protein kinase AsgD.
 
   0.837
AKI99983.1
Sensory box histidine kinase.
 
 
 0.832
AKI99519.1
Sensory box histidine kinase.
 
 
 0.831
AKJ00442.1
Tetratricopeptide repeat family.
 
   0.831
AKJ01383.1
Chemotaxis protein methyltransferase CheR.
 
   0.827
AKJ00885.1
Diguanylate cyclase/phosphodiesterase.
 
 
 0.824
AKJ00613.1
Sensory box histidine kinase.
 
   0.823
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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