STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02699.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
AKJ02698.1
3-oxoacyl-[acyl-carrier protein] reductase.
      0.934
AKJ02697.1
3-oxoacyl-[acyl-carrier protein] reductase.
   
   0.754
AKJ02700.1
Hypothetical protein.
       0.636
AKI99740.1
Hypothetical protein.
  
     0.594
AKJ07441.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.581
AKJ07051.1
Hypothetical protein.
  
     0.505
AKJ02595.1
Hypothetical protein.
  
     0.488
AKJ03610.1
Hypothetical protein.
  
     0.483
AKJ07908.1
Putative integral membrane protein.
  
     0.458
AKJ02495.1
Peptidase, M23/M37 family.
  
    0.455
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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