STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02702.1OmpA domain protein. (641 aa)    
Predicted Functional Partners:
AKJ08187.1
Flagellar motor rotation protein MotB.
  
 
 0.748
AKJ04614.1
Outer membrane protein A precursor.
  
     0.723
AKJ02701.1
Hypothetical protein.
       0.648
AKJ02714.1
Lytic transglycosylase, catalytic.
  
     0.576
AKJ07368.1
Lytic transglycosylase, catalytic.
  
     0.550
AKJ03149.1
Soluble lytic murein transglycosylase precursor.
 
  
 0.447
AKJ06767.1
Flagellar motor rotation protein MotB.
  
 
0.442
AKI99820.1
Flagellar motor rotation protein MotB.
  
 
0.441
AKJ01489.1
Soluble lytic murein transglycosylase precursor.
 
  
 0.438
AKJ00475.1
Flagellar motor rotation protein MotB.
  
 
0.436
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.