STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02709.1ParB-like nuclease domain protein. (297 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
     
 0.805
AKJ02711.1
Putative lipoprotein.
       0.803
rsmG
rRNA small subunit 7-methylguanosine; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.659
AKI98791.1
Chromosome.
  
 
 0.650
AKI99965.1
Chromosome.
  
 
 0.650
AKJ04240.1
Putative ATP/GTP-binding protein.
  
 
 0.650
AKJ06699.1
Chromosome.
  
 
 0.650
AKJ02707.1
Hypothetical protein.
     
 0.594
AKJ02708.1
Hypothetical protein.
     
 0.594
AKJ02706.1
Hypothetical protein.
     
 0.497
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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