STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02746.1Helicase. (852 aa)    
Predicted Functional Partners:
AKJ03898.1
ATP-dependent RNA helicase HrpA.
  
     0.629
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.
       0.558
AKJ03899.1
ATP-dependent RNA helicase HrpA.
  
     0.551
AKJ04207.1
ATPase components of ABC transporter.
  
     0.544
AKJ02745.1
Death on curing protein, Doc toxin.
       0.513
AKJ01750.1
Xaa-Pro aminopeptidase.
 
     0.469
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
 
     0.458
AKI99149.1
Chromosome segregation ATPase.
  
     0.457
AKJ04941.1
ATP-dependent helicase HrpB.
  
     0.428
AKJ02744.1
Prevent host death protein, Phd antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.423
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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