Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ02756.1Serine phosphatase RsbU, regulator of sigma subunit. (580 aa)    
Predicted Functional Partners:
AKJ05823.1
Flagellar motor switch protein FliM.
  
    0.921
AKJ02757.1
TPR domain protein, putative component of TonB system.
 
    0.848
AKJ07727.1
Serine-protein kinase RsbW.
 
 
 0.833
AKJ07736.1
Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.833
AKI99572.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.801
AKI99569.1
RsbS, negative regulator of sigma-B.
 
 
 0.787
AKI99568.1
RsbR, positive regulator of sigma-B.
 
 
 0.781
AKJ02758.1
Hypothetical protein.
       0.773
AKI99570.1
Anti-sigma B factor RsbT.
 
 
 0.755
AKI99571.1
Phosphoserine phosphatase rsbX.
 
 
 0.748
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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