STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02773.1Hypothetical protein. (262 aa)    
Predicted Functional Partners:
AKJ02772.1
Hypothetical protein.
 
    0.961
AKJ02774.1
Putative chaperonin.
 
   
 0.951
AKJ01153.1
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.704
AKJ02776.1
SWIM zinc finger domain protein.
 
     0.670
AKJ07341.1
Serine/threonine protein kinase.
  
 
 0.628
AKJ05111.1
WD40 repeat protein.
  
     0.587
AKJ02775.1
Hypothetical protein.
       0.559
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.519
AKJ07400.1
Formyltransferase.
  
   0.519
AKJ04657.1
2-phospho-L-lactate transferase; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
   
  
 0.495
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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