STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02788.1Siderophore biosynthesis non-ribosomal peptide synthetase modules. (723 aa)    
Predicted Functional Partners:
AKJ02787.1
Siderophore biosynthesis non-ribosomal peptide synthetase modules.
    0.994
AKJ06585.1
Non-ribosomal peptide synthetase.
  
 0.968
AKJ05084.1
Malonyl CoA-acyl carrier protein transacylase.
 0.963
AKJ05085.1
Malonyl CoA-acyl carrier protein transacylase.
 0.959
AKJ05086.1
Malonyl CoA-acyl carrier protein transacylase.
 0.959
AKJ00054.1
Long-chain-fatty-acid--CoA ligase.
 
0.955
AKJ08028.1
Benzoate-CoA ligase.
 
     0.954
AKJ00842.1
Malonyl CoA-acyl carrier protein transacylase.
 
     0.953
AKJ08027.1
Malonyl CoA-acyl carrier protein transacylase.
 
     0.951
AKJ03627.1
Malonyl CoA-acyl carrier protein transacylase.
 0.947
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.