STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02790.1TonB-dependent receptor. (793 aa)    
Predicted Functional Partners:
AKJ03212.1
TonB family protein.
 
 
 0.888
AKJ06332.1
TonB family protein.
 
 
0.842
AKJ06010.1
Nicel/Cobalt-specific TonB-dependent outer membrane receptor.
  
 
 0.839
AKJ08151.1
TonB family protein.
 
 
0.835
AKI99821.1
TonB family protein.
 
 
 0.797
AKJ07114.1
TonB-dependent receptor.
 
 
 0.787
AKJ02791.1
Hypothetical protein.
  
   0.722
AKI99812.1
TonB-dependent receptor.
 
 
 0.712
AKJ07688.1
Hypothetical protein.
  
     0.645
AKI99358.1
TonB-dependent receptor.
 
 
 0.640
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.