STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02813.1Tetratricopeptide repeat domain protein. (365 aa)    
Predicted Functional Partners:
AKJ02410.1
TPR domain protein, putative component of TonB system.
 
   0.765
AKJ01931.1
TPR domain protein, putative component of TonB system.
 
 
 
 0.751
AKJ02715.1
TolA protein.
 
   0.731
AKJ02404.1
TPR domain protein, putative component of TonB system.
 
  
 0.718
AKJ07673.1
Two-component system response regulator CreC.
  
     0.711
AKJ05724.1
General secretion pathway protein I.
  
     0.707
AKJ01149.1
HEAT repeat protein.
  
 
   0.706
AKJ03257.1
Adventurous gliding motility protein K.
 
 
 0.698
AKJ01603.1
TolA protein.
 
   0.697
AKJ07626.1
Tryptophan synthase alpha chain.
  
     0.693
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.