Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02814.1Response regulator. (113 aa)    
Predicted Functional Partners:
AKJ05823.1
Flagellar motor switch protein FliM.
  
  
 0.723
AKJ06898.1
Sensor histidine kinase.
  
    0.670
AKJ02455.1
Response regulator.
  
   0.639
AKJ05137.1
C4-dicarboxylate transport transcriptional regulatory protein.
  
 
   0.632
AKJ07084.1
Putative response regulator/chemotaxis protein CheW.
  
    0.588
AKJ02813.1
Tetratricopeptide repeat domain protein.
       0.547
AKJ00645.1
Chemotaxis regulator.
  
 
 0.538
AKJ01964.1
Response regulator receiver protein.
  
     0.530
AKJ07066.1
Chemotaxis regulator.
  
 
   0.507
AKJ04415.1
TolA protein.
  
 
   0.481
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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