Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKJ02818.1Response regulator/GGDEF domain protein. (458 aa)    
Predicted Functional Partners:
AKJ05823.1
Flagellar motor switch protein FliM.
  
  
 0.890
AKJ02820.1
Basic proline-rich protein precursor.
 
 
 0.867
AKJ05845.1
EAL domain protein.
  
 0.851
AKI99572.1
Putative SigmaB asociated two-component system sensor protein.
 
 0.794
AKJ07938.1
Hypothetical protein.
 
 
 0.794
AKJ02656.1
Response regulator.
 
 0.758
AKI99219.1
Sensor histidine kinase/response regulator.
 
 
 0.712
AKJ05826.1
Flagellum-specific ATP synthase FliI.
  
  
 0.692
AKJ08006.1
Signal transduction histidine kinase CheA.
  
 
 0.682
AKJ02600.1
Cell division protein FtsK.
 
 
 0.678
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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