Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02820.1Basic proline-rich protein precursor. (422 aa)    
Predicted Functional Partners:
AKJ02818.1
Response regulator/GGDEF domain protein.
 
 
 0.867
AKJ02819.1
Positive regulator of CheA protein activity.
  
  
 0.842
AKJ02542.1
Chemotaxis regulator.
  
 
   0.765
AKJ02163.1
Response regulator/GGDEF/GAF domain protein.
  
    0.761
AKJ02164.1
Two-component response regulator.
  
     0.758
AKJ07084.1
Putative response regulator/chemotaxis protein CheW.
 
 
 0.757
AKI99344.1
Response regulator.
  
   0.748
AKJ00645.1
Chemotaxis regulator.
  
 
 
 0.727
AKJ03063.1
Response regulatory protein.
  
     0.725
AKI99787.1
Putative two-component system response regulator.
  
   0.720
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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