STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02837.1TPR domain protein, putative component of TonB system. (378 aa)    
Predicted Functional Partners:
AKJ01594.1
MJ0042 family finger-like domain/tetratricopeptide repeat protein.
 
 
 0.857
AKJ02757.1
TPR domain protein, putative component of TonB system.
 
 
 0.818
AKJ04298.1
Tetratricopeptide repeat family.
 
 
 0.817
AKJ02704.1
Hypothetical protein.
 
 
 0.811
AKJ02836.1
Hypothetical protein.
   
 
 0.800
AKJ05797.1
TPR repeat protein.
 
     0.763
AKJ03134.1
Tetratricopeptide repeat protein.
 
   
 0.756
AKJ08293.1
TPR repeat protein.
 
 
 0.746
AKJ05800.1
Tetratricopeptide repeat protein.
 
 
 0.743
AKJ01984.1
TPR repeat protein.
 
     0.729
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.