STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02855.1Adenylate cyclase. (332 aa)    
Predicted Functional Partners:
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.878
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.873
AKJ02816.1
Sensor histidine kinase/response rgulator.
 
 
 
 0.847
AKJ02840.1
Two-component hybrid sensor and regulator.
 
 
 0.839
AKJ01139.1
Two-component sensor PilS.
 
 
 
 0.824
AKJ08451.1
DNA-binding response regulator KdpE.
  
   0.812
AKJ07291.1
Chemotaxis protein methyltransferase CheR.
 
 
 0.811
AKJ02691.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
   0.810
AKJ01623.1
Two-component response regulator.
  
   0.796
AKJ07084.1
Putative response regulator/chemotaxis protein CheW.
 
 
 0.795
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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