Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI99085.1 | AKJ02856.1 | AA314_00712 | AA314_04482 | Spermidine synthase. | Agmatinase; Belongs to the arginase family. | 0.932 |
AKJ02766.1 | AKJ02856.1 | AA314_04392 | AA314_04482 | Spermidine synthase-like protein. | Agmatinase; Belongs to the arginase family. | 0.926 |
AKJ02856.1 | AKI99085.1 | AA314_04482 | AA314_00712 | Agmatinase; Belongs to the arginase family. | Spermidine synthase. | 0.932 |
AKJ02856.1 | AKJ02766.1 | AA314_04482 | AA314_04392 | Agmatinase; Belongs to the arginase family. | Spermidine synthase-like protein. | 0.926 |
AKJ02856.1 | AKJ04815.1 | AA314_04482 | AA314_06441 | Agmatinase; Belongs to the arginase family. | Hypothetical protein. | 0.926 |
AKJ02856.1 | AKJ07481.1 | AA314_04482 | AA314_09107 | Agmatinase; Belongs to the arginase family. | Spermidine synthase. | 0.926 |
AKJ02856.1 | argD | AA314_04482 | AA314_06654 | Agmatinase; Belongs to the arginase family. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.559 |
AKJ02856.1 | hutH | AA314_04482 | AA314_04934 | Agmatinase; Belongs to the arginase family. | Histidine ammonia-lyase. | 0.647 |
AKJ02856.1 | speA | AA314_04482 | AA314_06894 | Agmatinase; Belongs to the arginase family. | Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.938 |
AKJ02856.1 | speE | AA314_04482 | AA314_02430 | Agmatinase; Belongs to the arginase family. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.900 |
AKJ02856.1 | speE-2 | AA314_04482 | AA314_03696 | Agmatinase; Belongs to the arginase family. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.926 |
AKJ02856.1 | speE-3 | AA314_04482 | AA314_03697 | Agmatinase; Belongs to the arginase family. | Hypothetical protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.926 |
AKJ04815.1 | AKJ02856.1 | AA314_06441 | AA314_04482 | Hypothetical protein. | Agmatinase; Belongs to the arginase family. | 0.926 |
AKJ07481.1 | AKJ02856.1 | AA314_09107 | AA314_04482 | Spermidine synthase. | Agmatinase; Belongs to the arginase family. | 0.926 |
argD | AKJ02856.1 | AA314_06654 | AA314_04482 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | Agmatinase; Belongs to the arginase family. | 0.559 |
hutH | AKJ02856.1 | AA314_04934 | AA314_04482 | Histidine ammonia-lyase. | Agmatinase; Belongs to the arginase family. | 0.647 |
speA | AKJ02856.1 | AA314_06894 | AA314_04482 | Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | Agmatinase; Belongs to the arginase family. | 0.938 |
speA | speE | AA314_06894 | AA314_02430 | Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.499 |
speE | AKJ02856.1 | AA314_02430 | AA314_04482 | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | Agmatinase; Belongs to the arginase family. | 0.900 |
speE | speA | AA314_02430 | AA314_06894 | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.499 |
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