STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02865.1Alkaline serine exoprotease A precursor. (874 aa)    
Predicted Functional Partners:
AKJ02980.1
Hypothetical protein.
  
     0.656
AKJ06437.1
Hypothetical protein.
  
 
   0.556
AKJ07714.1
Cell wall-associated hydrolase domain protein.
  
     0.551
AKJ02864.1
Cyn operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
       0.534
AKJ03589.1
Hypothetical protein.
  
     0.497
AKJ02866.1
Putative reductase.
       0.459
AKJ03927.1
Cytoplasmic membrane protein.
  
     0.447
AKI99179.1
Putative aggregation factor core protein MAFp3.
  
     0.436
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.