STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02875.1Manganese-dependent protein-tyrosine phosphatase. (245 aa)    
Predicted Functional Partners:
AKJ00488.1
Capsular exopolysaccharide family protein.
 
  
 0.923
AKJ04659.1
Tyrosine-protein kinase EpsD.
 
  
 0.879
AKJ02874.1
Hypothetical protein.
       0.777
AKJ02876.1
Hypothetical protein.
       0.759
AKJ05132.1
Capsular polysaccharide biosynthesis protein.
 
  
 0.714
AKJ06905.1
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.578
AKI99047.1
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.556
AKJ03599.1
Lipid carrier UDP-N-acetylgalactosaminyltransferase.
 
  
 0.536
AKJ03875.1
Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.535
AKJ04658.1
Capsular polysaccharide biosynthesis protein.
 
  
 0.521
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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