STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02887.1Hypothetical protein. (685 aa)    
Predicted Functional Partners:
AKJ02886.1
Hypothetical protein.
       0.773
AKJ02884.1
Hypothetical protein.
       0.758
AKJ02883.1
Hypothetical protein.
       0.752
AKJ02885.1
ATPase, AAA family.
       0.752
AKJ02888.1
Hypothetical protein.
       0.650
AKJ02889.1
Hypothetical protein.
       0.534
AKJ02890.1
Hypothetical protein.
       0.497
AKJ02882.1
Glycosyltransferase.
       0.481
AKJ02891.1
NHL repeat domain protein.
       0.415
AKJ02894.1
Hypothetical protein.
       0.415
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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