STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02896.1Hypothetical protein. (357 aa)    
Predicted Functional Partners:
AKJ02893.1
Hypothetical protein.
 
 
 0.996
AKJ02900.1
Phage tail sheath protein FI.
 
 
 0.993
AKJ02902.1
Phage tail sheath protein FI.
 
 
 0.991
AKJ02891.1
NHL repeat domain protein.
 
  
 0.987
AKJ07344.1
Hypothetical protein.
 
 
 0.984
AKJ02892.1
Hypothetical protein.
 
 
   0.983
AKJ02898.1
Hypothetical protein.
 
   0.979
AKJ02899.1
Hypothetical protein.
 
 
   0.975
AKJ02901.1
Hypothetical protein.
 
 
   0.975
AKJ07350.1
Phage tail sheath protein FI.
 
 
 0.974
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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