STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02919.13,5-diaminohexanoate dehydrogenase. (343 aa)    
Predicted Functional Partners:
AKJ02920.1
L-beta-lysine 5,6-aminomutase alpha subunit.
 
 
 0.994
AKJ02922.1
L-beta-lysine 5,6-aminomutase beta subunit.
 
 
 0.994
AKJ02924.1
3-keto-5-aminohexanoate cleavage enzyme.
 
  
  0.993
AKJ05317.1
Hypothetical protein.
 
  
  0.976
AKJ02923.1
3-aminobutyryl-CoA ammonia-lyase.
 
 
   0.944
AKJ02921.1
Hypothetical protein.
       0.746
AKJ02613.1
Lysine 2,3-aminomutase.
 
     0.732
AKJ02614.1
Lysine 2,3-aminomutase.
 
     0.593
AKJ02918.1
Putative esterase.
       0.477
bioF
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
  
  
 0.445
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.