Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ02923.13-aminobutyryl-CoA ammonia-lyase. (131 aa)    
Predicted Functional Partners:
AKJ02924.1
3-keto-5-aminohexanoate cleavage enzyme.
  
 0.999
AKJ05317.1
Hypothetical protein.
  
 0.991
AKJ02920.1
L-beta-lysine 5,6-aminomutase alpha subunit.
 
   
 0.954
AKJ02922.1
L-beta-lysine 5,6-aminomutase beta subunit.
 
   
 0.954
AKJ02919.1
3,5-diaminohexanoate dehydrogenase.
 
     0.942
AKJ01874.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.925
AKJ01191.1
Glutaryl-CoA dehydrogenase.
    
 0.903
AKJ02921.1
Hypothetical protein.
       0.773
AKJ02613.1
Lysine 2,3-aminomutase.
 
   
 0.732
AKJ02614.1
Lysine 2,3-aminomutase.
 
   
 0.641
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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