Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKJ02936.1Putative periplasmic protein. (290 aa)    
Predicted Functional Partners:
AKI99246.1
Tetratricopeptide repeat protein.
  
     0.724
AKJ07561.1
Hypothetical protein.
 
     0.693
AKJ00918.1
Hypothetical protein.
  
     0.666
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
   
    0.655
AKI98377.1
Hypothetical protein.
 
     0.615
AKJ01518.1
Phage lysin, 1,4-beta-N-acetylmuramidase.
  
     0.593
AKJ08480.1
Putative periplasmic protein.
 
     0.574
AKJ05239.1
SAM-dependent methyltransferase.
  
     0.564
AKJ05136.1
Excinuclease ABC subunit C.
   
    0.556
AKJ03788.1
Acetyltransferase, GNAT family.
  
     0.553
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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