STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02941.1Beta-hydroxyacid dehydrogenase. (293 aa)    
Predicted Functional Partners:
AKJ02273.1
Hypothetical protein.
  
    0.519
AKJ04802.1
Transcriptional regulator, TetR family.
  
     0.506
AKJ02857.1
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family.
  
  
 0.500
AKJ02940.1
Putative secreted protein.
     
 0.453
AKJ01657.1
Streptogrisin-C precursor.
  
     0.443
AKJ05991.1
Hypothetical protein.
  
     0.435
AKJ05377.1
Transcriptional regulator, LuxR family protein.
  
     0.407
AKJ02422.1
Polyketide synthase.
 
     0.404
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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