STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02954.1Cellulosomal protein. (578 aa)    
Predicted Functional Partners:
AKJ07556.1
Inner spore coat protein H.
  
     0.763
selO
Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.
       0.543
AKJ02953.1
Hypothetical protein.
       0.500
AKJ02956.1
Phytanoyl-CoA dioxygenase domain containing 1.
       0.492
AKJ00155.1
Squalene--hopene cyclase.
  
     0.472
AKJ00315.1
ABC-type Na+ efflux pump, permease component.
  
     0.466
AKJ05985.1
Tat.
  
     0.436
AKJ05986.1
Cellulose-binding domain protein.
  
     0.435
AKJ05582.1
Hypothetical protein.
 
     0.417
AKJ07578.1
tolB protein precursor protein.
  
     0.411
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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