Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI98553.1 | AKJ02965.1 | AA314_00180 | AA314_04591 | Membrane-bound lytic murein transglycosylase D precursor. | OpcA, an allosteric effector of glucose-6-phosphate. | 0.402 |
AKI98553.1 | AKJ07282.1 | AA314_00180 | AA314_08908 | Membrane-bound lytic murein transglycosylase D precursor. | Stage II sporulation protein D. | 0.409 |
AKJ01657.1 | AKJ02550.1 | AA314_03283 | AA314_04176 | Streptogrisin-C precursor. | Phage tail length tape-measure protein. | 0.516 |
AKJ01657.1 | AKJ02965.1 | AA314_03283 | AA314_04591 | Streptogrisin-C precursor. | OpcA, an allosteric effector of glucose-6-phosphate. | 0.402 |
AKJ02550.1 | AKJ01657.1 | AA314_04176 | AA314_03283 | Phage tail length tape-measure protein. | Streptogrisin-C precursor. | 0.516 |
AKJ02550.1 | AKJ02898.1 | AA314_04176 | AA314_04524 | Phage tail length tape-measure protein. | Hypothetical protein. | 0.450 |
AKJ02550.1 | AKJ02965.1 | AA314_04176 | AA314_04591 | Phage tail length tape-measure protein. | OpcA, an allosteric effector of glucose-6-phosphate. | 0.630 |
AKJ02898.1 | AKJ02550.1 | AA314_04524 | AA314_04176 | Hypothetical protein. | Phage tail length tape-measure protein. | 0.450 |
AKJ02898.1 | AKJ02965.1 | AA314_04524 | AA314_04591 | Hypothetical protein. | OpcA, an allosteric effector of glucose-6-phosphate. | 0.439 |
AKJ02964.1 | AKJ02965.1 | AA314_04590 | AA314_04591 | Hypothetical protein. | OpcA, an allosteric effector of glucose-6-phosphate. | 0.570 |
AKJ02965.1 | AKI98553.1 | AA314_04591 | AA314_00180 | OpcA, an allosteric effector of glucose-6-phosphate. | Membrane-bound lytic murein transglycosylase D precursor. | 0.402 |
AKJ02965.1 | AKJ01657.1 | AA314_04591 | AA314_03283 | OpcA, an allosteric effector of glucose-6-phosphate. | Streptogrisin-C precursor. | 0.402 |
AKJ02965.1 | AKJ02550.1 | AA314_04591 | AA314_04176 | OpcA, an allosteric effector of glucose-6-phosphate. | Phage tail length tape-measure protein. | 0.630 |
AKJ02965.1 | AKJ02898.1 | AA314_04591 | AA314_04524 | OpcA, an allosteric effector of glucose-6-phosphate. | Hypothetical protein. | 0.439 |
AKJ02965.1 | AKJ02964.1 | AA314_04591 | AA314_04590 | OpcA, an allosteric effector of glucose-6-phosphate. | Hypothetical protein. | 0.570 |
AKJ02965.1 | AKJ04086.1 | AA314_04591 | AA314_05712 | OpcA, an allosteric effector of glucose-6-phosphate. | Hypothetical protein. | 0.416 |
AKJ02965.1 | AKJ04587.1 | AA314_04591 | AA314_06213 | OpcA, an allosteric effector of glucose-6-phosphate. | Putative esterase. | 0.410 |
AKJ02965.1 | AKJ06531.1 | AA314_04591 | AA314_08157 | OpcA, an allosteric effector of glucose-6-phosphate. | Membrane-bound lytic murein transglycosylase D precursor. | 0.451 |
AKJ02965.1 | AKJ07282.1 | AA314_04591 | AA314_08908 | OpcA, an allosteric effector of glucose-6-phosphate. | Stage II sporulation protein D. | 0.431 |
AKJ02965.1 | vgb | AA314_04591 | AA314_02962 | OpcA, an allosteric effector of glucose-6-phosphate. | Hypothetical protein; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | 0.458 |
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