Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ02965.1OpcA, an allosteric effector of glucose-6-phosphate. (707 aa)    
Predicted Functional Partners:
AKJ02550.1
Phage tail length tape-measure protein.
 
  
 0.614
AKJ02964.1
Hypothetical protein.
       0.570
AKI98553.1
Membrane-bound lytic murein transglycosylase D precursor.
     
 0.470
AKJ05823.1
Flagellar motor switch protein FliM.
  
 
 0.467
AKJ06531.1
Membrane-bound lytic murein transglycosylase D precursor.
     
 0.467
vgb
Hypothetical protein; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid.
  
     0.458
AKI98398.1
N-acetylmuramoyl-L-alanine amidase.
     
 0.448
AKI99574.1
N-acetylmuramoyl-L-alanine amidase.
     
 0.448
AKJ00530.1
ErfK/YbiS/YcfS/YnhG family protein.
  
  
 0.447
AKJ02898.1
Hypothetical protein.
 
  
 0.444
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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