STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02972.1Hypothetical protein. (413 aa)    
Predicted Functional Partners:
AKJ02971.1
Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily.
     
0.776
AKI99928.1
Hypothetical protein.
  
  
 0.735
AKJ02884.1
Hypothetical protein.
  
     0.594
AKJ02968.1
Transcriptional regulator, LuxR family protein.
 
 
0.586
AKJ05293.1
Hypothetical protein.
  
     0.576
AKJ02097.1
High-affnity carbon uptake protein Hat/HatR.
  
     0.565
AKJ06639.1
Heterocyst differentiation protein.
  
     0.562
AKJ02371.1
Putative secreted sugar hydrolase.
  
     0.545
AKJ07788.1
Membrane-anchored protein.
  
     0.545
AKJ03791.1
High-affnity carbon uptake protein Hat/HatR.
  
     0.539
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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