STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ02979.1Tryptophan synthase alpha chain. (278 aa)    
Predicted Functional Partners:
ftsE
Cell division transporter, ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
  
 0.590
AKJ04587.1
Putative esterase.
   
  
 0.521
AKI98693.1
Hypothetical protein.
   
  
 0.503
AKJ05446.1
Serine/threonine protein kinase PrkC, regulator of stationary phase.
  
  
 0.434
AKJ03436.1
SSU ribosomal protein S1p.
   
  
 0.431
AKJ03867.1
SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
   
  
 0.431
AKJ02407.1
FHA domain containing protein.
   
  
 0.425
AKJ04296.1
Putative abductin-like protein.
   
  
 0.425
AKI98533.1
Cell wall surface anchor family protein.
   
  
 0.421
AKI99362.1
Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
   
  
 0.421
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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